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Datasets for CPTAC-ICPC - Combined Lung Adenocarcinoma Cohorts

OMICS Dataset Link Description Level Unit Samples Atrributes File type
HS CPTAC ICPC LUAD proteome NArm Normal Download Human CPTAC ICPC LUAD proteome Gene Normal TMT log2 ratio Gene TMT log2 ratio 388 11777 cct
HS CPTAC ICPC LUAD proteome NArm Tumor Download Human CPTAC ICPC LUAD proteome Gene Tumor TMT log2 ratio Gene TMT log2 ratio 406 11777 cct
HS CPTAC ICPC LUAD proteome NArm TumorNormal Download Human CPTAC ICPC LUAD proteome Gene Tumor+Normal TMT log2 ratio Gene TMT log2 ratio 794 11777 cct
HS CPTAC ICPC LUAD phosphoproteome NArm Normal geneLevel Download Human CPTAC ICPC LUAD phosphoproteome Gene Normal TMT log2 ratio (mean of all sites/gene) Gene TMT log2 ratio 369 6856 cct
HS CPTAC ICPC LUAD phosphoproteome NArm Tumor geneLevel Download Human CPTAC ICPC LUAD phosphoproteome Gene Tumor TMT log2 ratio (mean of all sites/gene) Gene TMT log2 ratio 387 6856 cct
HS CPTAC ICPC LUAD phosphoproteome NArm TumorNormal geneLevel Download Human CPTAC ICPC LUAD phosphoproteome Gene Tumor+Normal TMT log2 ratio (mean of all sites/gene) Gene TMT log2 ratio 756 6856 cct
HS CPTAC ICPC LUAD phosphoproteome NArm Normal Download Human CPTAC ICPC LUAD phosphoproteome Site Normal TMT log2 ratio Site TMT log2 ratio 369 34396 cct
HS CPTAC ICPC LUAD phosphoproteome NArm Tumor Download Human CPTAC ICPC LUAD phosphoproteome Site Tumor TMT log2 ratio Site TMT log2 ratio 387 34396 cct
HS CPTAC ICPC LUAD phosphoproteome NArm TumorNormal Download Human CPTAC ICPC LUAD phosphoproteome Site Tumor+Normal TMT log2 ratio Site TMT log2 ratio 756 34396 cct
HS CPTAC ICPC LUAD ubiquitylome NArm Normal geneLevel Download Human CPTAC ICPC LUAD ubiquitylome Gene Normal TMT log2 ratio (mean of all sites/gene) Gene TMT log2 ratio 137 4102 cct
HS CPTAC ICPC LUAD ubiquitylome NArm Tumor geneLevel Download Human CPTAC ICPC LUAD ubiquitylome Gene Tumor TMT log2 ratio (mean of all sites/gene) Gene TMT log2 ratio 167 4102 cct
HS CPTAC ICPC LUAD ubiquitylome NArm TumorNormal geneLevel Download Human CPTAC ICPC LUAD ubiquitylome Gene Tumor+Normal TMT log2 ratio (mean of all sites/gene) Gene TMT log2 ratio 304 4102 cct
HS CPTAC ICPC LUAD ubiquitylome NArm Normal Download Human CPTAC ICPC LUAD ubiquitylome Site Normal TMT log2 ratio Site TMT log2 ratio 137 15635 cct
HS CPTAC ICPC LUAD ubiquitylome NArm Tumor Download Human CPTAC ICPC LUAD ubiquitylome Site Tumor TMT log2 ratio Site TMT log2 ratio 167 15635 cct
HS CPTAC ICPC LUAD ubiquitylome NArm TumorNormal Download Human CPTAC ICPC LUAD ubiquitylome Site Tumor+Normal TMT log2 ratio Site TMT log2 ratio 304 15635 cct
HS CPTAC ICPC LUAD acetylome NArm Normal geneLevel Download Human CPTAC ICPC LUAD acetylome Gene Normal TMT log2 ratio (mean of all sites/gene) Gene TMT log2 ratio 213 2566 cct
HS CPTAC ICPC LUAD acetylome NArm Tumor geneLevel Download Human CPTAC ICPC LUAD acetylome Gene Tumor TMT log2 ratio (mean of all sites/gene) Gene TMT log2 ratio 222 2566 cct
HS CPTAC ICPC LUAD acetylome NArm TumorNormal geneLevel Download Human CPTAC ICPC LUAD acetylome Gene Tumor+Normal TMT log2 ratio (mean of all sites/gene) Gene TMT log2 ratio 435 2566 cct
HS CPTAC ICPC LUAD acetylome NArm Normal Download Human CPTAC ICPC LUAD acetylome Site Normal TMT log2 ratio Site TMT log2 ratio 213 8641 cct
HS CPTAC ICPC LUAD acetylome NArm Tumor Download Human CPTAC ICPC LUAD acetylome Site Tumor TMT log2 ratio Site TMT log2 ratio 222 8641 cct
HS CPTAC ICPC LUAD acetylome NArm TumorNormal Download Human CPTAC ICPC LUAD acetylome Site Tumor+Normal TMT log2 ratio Site TMT log2 ratio 435 8641 cct
HS CPTAC ICPC LUAD RNAseq log2 TPM Normal Download Human CPTAC ICPC LUAD RNA expression Gene Normal RSEM TPM log2 ratio (relative to median value of gene) Gene gene median-centered log2 RSEM TPM 380 16069 cct
HS CPTAC ICPC LUAD RNAseq log2 TPM Tumor Download Human CPTAC ICPC LUAD RNA expression Gene Tumor RSEM TPM log2 ratio (relative to median value of gene) Gene gene median-centered log2 RSEM TPM 402 16069 cct
HS CPTAC ICPC LUAD RNAseq log2 TPM TumorNormal Download Human CPTAC ICPC LUAD RNA expression Gene Tumor+Normal RSEM TPM log2 ratio (relative to median value of gene) Gene gene median-centered log2 RSEM TPM 782 16069 cct
HS CPTAC ICPC LUAD SCNA log2 gene level Download Human CPTAC ICPC LUAD SCNV Gene Tumor log2 copy number ratio from GISTIC 2 Gene GISTIC log2 ratio 401 2601 cct
HS CPTAC ICPC LUAD Methylation NArm Gene level Normal Download Human CPTAC ICPC LUAD methylation Gene Normal beta value (mean of probes) Gene mean beta value 185 13517 cct
HS CPTAC ICPC LUAD Methylation NArm Gene level Tumor Download Human CPTAC ICPC LUAD methylation Gene Tumor beta value (mean of probes) Gene mean beta value 186 13517 cct
HS CPTAC ICPC LUAD Methylation NArm Gene level TumorNormal Download Human CPTAC ICPC LUAD methylation Gene Tumor+Normal beta value (mean of probes) Gene mean beta value 371 13517 cct
HS CPTAC ICPC LUAD microRNA log2 RPM Normal Download Human CPTAC ICPC LUAD microRNA expression Gene Normal log2 RPM Gene log2 RPM 208 1232 cct
HS CPTAC ICPC LUAD microRNA log2 RPM Tumor Download Human CPTAC ICPC LUAD microRNA expression Gene Tumor log2 RPM Gene log2 RPM 221 1339 cct
HS CPTAC ICPC LUAD microRNA log2 RPM TumorNormal Download Human CPTAC ICPC LUAD microRNA expression Gene Tumor+Normal log2 RPM Gene log2 RPM 429 1392 cct
HS CPTAC ICPC LUAD CLI Download Human CPTAC ICPC LUAD clinical Clinical Clinical Clinical phenotype 794 39 tsi
HS CPTAC ICPC LUAD SNV Mutations gene level Download Human CPTAC ICPC LUAD mutation Gene Tumor mutation status (1 if coding mutation present; otherwise 0) Gene mutation status (coding) 401 15338 cbt