LinkedOmics
    Analyzing multi-omics data within and acr oss 32 cancer types

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Datasets for Paediatric High Grade Glioma

OMICS Dataset Link Description Level Unit Samples Atrributes File type
pediatric high grade glioma cli Download Human Pediatric HGG Clinical Clinical Clinical Clinical Phenotype 86 16 tsi
pediatric high grade glioma log2SCNA all gene level Download Human Pediatric HGG SCNV Gene Log2 copy-number values for each gene (from Affymetrix SNP6) Gene Copy Number Change 86 14655 cct
pediatric high grade glioma RNA log2 Download Human Pediatric HGG RNA expression Gene mRNA expression (RNA-Seq log2) Gene Expression (Normalized Log2ratio) 20 14409 cct
pediatric high grade glioma SCNA all gene level Download Human Pediatric HGG SCNV Gene Putative copy-number from GISTIC 2.0. Gene Copy Number Change 86 14655 cct
pediatric high grade glioma somatic mutation gene level Download Human Pediatric HGG Mutation Gene Mutation data from whole exome sequencing. Gene Mutation Status (2 or more identified by strelka2, mutect2, lancet, and VarDict Java) 85 10112 cbt
pediatric high grade glioma somatic mutation site level Download Human Pediatric HGG Mutation Mutation Site Mutation data from whole exome sequencing. Mutation Site Mutation Site Status (2 or more identified by strelka2, mutect2, lancet, and VarDict Java) 85 19707 cbt