Clinical |
Download |
Clinical annotation |
Clinical |
Phenotype |
80 |
11 |
tsi |
Methylation (CpG-site level, HM450K) |
Download |
Methylation data of tumor samples at CpG-site level (Beta values, Illumina HM450K platform) |
CpG |
Beta Values (Val-0.5) |
80 |
337072 |
cct |
Methylation (Gene level, HM450K) |
Download |
Methylation data of tumor samples at Gene level (Beta values, Illumina HM450K platform) |
gene |
Beta Values (Val-0.5) |
80 |
20122 |
cct |
miRNA (Gene level) |
Download |
miRNA expression for tumor samples (Normalized, RPM) |
miRgene |
Expression (RPM, Log2(Val+1)) |
80 |
724 |
cct |
Mutation (Gene level) |
Download |
Somatic mutations at gene level SNVs |
gene |
Mutation Status (MutSig2CV) |
80 |
17 |
cbt |
Mutation (Site level) |
Download |
Somatic mutations at site level SNVs |
mutationsite |
Mutation Status (MutSig2CV) |
80 |
6 |
cbt |
RNAseq (HiSeq, Gene level) |
Download |
RNAseq data normalized counts (Illumina HiSeq platform, Gene-level, Normalized log2 RPKM) |
gene |
Expression (RSEM, Log2(Val+1)) |
80 |
18993 |
cct |
SCNV (Focal level, log-ratio) |
Download |
Copy number change at the focal level, GISTIC2 log ratio |
focal |
Copy Number Change (GISTIC2, Log2ratio) |
80 |
21 |
cct |
SCNV (Focal level, Thresholded) |
Download |
Copy number change at the focal level, GISTIC2 thresholded |
focal |
Copy Number Change (GISTIC2, Log2ratio) |
80 |
3 |
cgt |
SCNV (Gene level, log-ratio) |
Download |
Copy number change at the gene level, GISTIC2 log ratio format |
gene |
Copy Number Change (GISTIC2, Log2ratio) |
80 |
24776 |
cct |
SCNV (Gene level, Thresholded) |
Download |
Copy number change at the gene level, GISTIC2 thresholded |
gene |
Copy Number Change (GISTIC2, Log2ratio) |
80 |
23597 |
cgt |